Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV5A0A0B4J249 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 AC092667.1-201ENST00000434301 2586 ntBASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV5A0A0B4J249 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 AC099791.2-201ENST00000605725 427 ntBASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 MIR6724-1-201ENST00000616420 92 ntBASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 MIR6724-2-201ENST00000616483 92 ntBASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 MIR6724-4-201ENST00000617390 92 ntBASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 MIR6724-3-201ENST00000622482 92 ntBASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 FEM1AP1-201ENST00000431297 1995 ntBASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 AL049796.1-201ENST00000565336 1766 ntBASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV5A0A0B4J249 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 OXCT2P1-201ENST00000447263 1535 ntBASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV5A0A0B4J249 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 UNC93B8-201ENST00000511903 705 ntBASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV5A0A0B4J249 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 RARRES2P1-201ENST00000474487 481 ntBASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV5A0A0B4J249 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms