Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 FEM1AP4-201ENST00000443167 1987 ntBASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-1A0A0B4J241 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 Z92544.1-202ENST00000571933 1220 ntBASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 AC104564.3-201ENST00000582367 638 ntBASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 AL499627.2-201ENST00000606283 725 ntBASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV13-1A0A0B4J241 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV13-1A0A0B4J241 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV13-1A0A0B4J241 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV13-1A0A0B4J241 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV13-1A0A0B4J241 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV13-1A0A0B4J241 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
TRAV13-1A0A0B4J241 AC073130.3-201ENST00000624389 2278 ntBASIC14.71□□□□□ -0.06
TRAV13-1A0A0B4J241 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV13-1A0A0B4J241 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.71□□□□□ -0.06
TRAV13-1A0A0B4J241 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 OR7E47P-201ENST00000546390 1422 ntBASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 AC239859.2-201ENST00000444165 318 ntBASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 AC079089.2-201ENST00000531211 1277 ntBASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 AL117332.1-201ENST00000622628 974 ntBASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms