Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-2A0A0B4J237 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-2A0A0B4J237 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAV8-2A0A0B4J237 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 MIR4767-201ENST00000582827 78 ntBASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-2A0A0B4J237 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 UNC93B3-201ENST00000308076 687 ntBASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-2A0A0B4J237 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 AC003102.1-202ENST00000563394 1796 ntBASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-2A0A0B4J237 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 BX842568.3-201ENST00000418104 571 ntBASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-2A0A0B4J237 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 AC024257.2-201ENST00000549699 147 ntBASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 AC133561.4-201ENST00000566112 224 ntBASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-2A0A0B4J237 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV8-2A0A0B4J237 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms