Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FEM1AP1-201ENST00000431297 1995 ntBASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 Z92544.1-202ENST00000571933 1220 ntBASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AL117332.1-201ENST00000622628 974 ntBASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV8-1A0A0A6YYK1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC006455.2-201ENST00000429931 906 ntBASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 pRNA.6-201ENST00000610482 90 ntBASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 pRNA.5-201ENST00000612139 90 ntBASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 pRNA.11-201ENST00000618423 90 ntBASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 pRNA.13-201ENST00000619112 90 ntBASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-1A0A0A6YYK1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 OXCT2P1-201ENST00000447263 1535 ntBASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC239859.2-201ENST00000444165 318 ntBASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC241377.3-202ENST00000626088 1088 ntBASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC241585.3-202ENST00000628937 1088 ntBASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC245100.8-202ENST00000629247 1058 ntBASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AL049796.1-201ENST00000565336 1766 ntBASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AL121603.2-201ENST00000557373 2117 ntBASIC16.04■□□□□ 0.16
TRAV8-1A0A0A6YYK1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms