Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 FEM1AP1-201ENST00000431297 1995 ntBASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-7A0A0A0MS04 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 OXCT2P1-201ENST00000447263 1535 ntBASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRBV6-7A0A0A0MS04 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 AL512631.2-201ENST00000604634 923 ntBASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-7A0A0A0MS04 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 AC010525.1-201ENST00000585559 441 ntBASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV6-7A0A0A0MS04 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV6-7A0A0A0MS04 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
TRBV6-7A0A0A0MS04 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-7A0A0A0MS04 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 AL034346.1-201ENST00000568244 1277 ntBASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 AL138724.1-201ENST00000606771 1088 ntBASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-7A0A0A0MS04 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-7A0A0A0MS04 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms