Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PTCH2Q9Y6C5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 FAM197Y4-202ENST00000622692 608 ntBASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCH2Q9Y6C5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 SNORA78-201ENST00000459373 127 ntBASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCH2Q9Y6C5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 KRT18P21-201ENST00000515767 1272 ntBASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 RPPH1-201ENST00000516869 333 ntBASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 Z99916.2-201ENST00000604037 246 ntBASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.23■■□□□ 1.47
PTCH2Q9Y6C5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 AL139125.2-201ENST00000623134 1869 ntBASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 LINC01023-201ENST00000606054 436 ntBASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCH2Q9Y6C5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 C1QBPP2-201ENST00000528754 825 ntBASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCH2Q9Y6C5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.2■■□□□ 1.47
PTCH2Q9Y6C5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.47
PTCH2Q9Y6C5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 AC079089.2-201ENST00000531211 1277 ntBASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 AL162412.1-201ENST00000567129 965 ntBASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 AL591742.1-201ENST00000604433 565 ntBASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PTCH2Q9Y6C5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCH2Q9Y6C5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms