Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNX11Q9Y5W9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 AC133552.2-202ENST00000575694 574 ntBASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX11Q9Y5W9 C1orf229-201ENST00000623686 2258 ntBASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 AC098934.4-201ENST00000564127 592 ntBASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 AC133041.1-202ENST00000642053 222 ntBASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNX11Q9Y5W9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNX11Q9Y5W9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.08■□□□□ 0.97
SNX11Q9Y5W9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNX11Q9Y5W9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNX11Q9Y5W9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.08■□□□□ 0.97
SNX11Q9Y5W9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNX11Q9Y5W9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.08■□□□□ 0.97
SNX11Q9Y5W9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNX11Q9Y5W9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNX11Q9Y5W9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.08■□□□□ 0.96
SNX11Q9Y5W9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.08■□□□□ 0.96
SNX11Q9Y5W9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 OR7E47P-201ENST00000546390 1422 ntBASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.07■□□□□ 0.96
SNX11Q9Y5W9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX11Q9Y5W9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 AC073210.2-201ENST00000430369 194 ntBASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 FAM201B-201ENST00000458407 597 ntBASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX11Q9Y5W9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 TERF1P5-201ENST00000477545 1207 ntBASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 AC013268.1-206ENST00000638368 961 ntBASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 AC112229.1-201ENST00000639295 961 ntBASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX11Q9Y5W9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms