Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 OR7E47P-201ENST00000546390 1422 ntBASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 EDA-201ENST00000338901 1233 ntBASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHA9Q9Y5H5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 AC008764.7-201ENST00000593779 1081 ntBASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PCDHA9Q9Y5H5 AC026471.6-201ENST00000622954 1905 ntBASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 AL157384.1-201ENST00000445995 2473 ntBASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 AC133561.4-201ENST00000566112 224 ntBASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 AC126544.1-201ENST00000580842 1059 ntBASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 AL139246.5-201ENST00000606645 996 ntBASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHA9Q9Y5H5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 AP001330.3-201ENST00000520123 633 ntBASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 AC027682.1-201ENST00000562846 899 ntBASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 AL355001.2-201ENST00000620617 1191 ntBASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHA9Q9Y5H5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 AC099791.1-201ENST00000416440 715 ntBASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHA9Q9Y5H5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PCDHA9Q9Y5H5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA9Q9Y5H5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHA9Q9Y5H5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.4■□□□□ 0.86
PCDHA9Q9Y5H5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA9Q9Y5H5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHA9Q9Y5H5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHA9Q9Y5H5 AL031432.3-201ENST00000607698 485 ntBASIC20.4■□□□□ 0.86
PCDHA9Q9Y5H5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA9Q9Y5H5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHA9Q9Y5H5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA9Q9Y5H5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA9Q9Y5H5 IGHV3-19-201ENST00000521488 291 ntBASIC20.39■□□□□ 0.85
PCDHA9Q9Y5H5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA9Q9Y5H5 AF213884.3-201ENST00000563833 479 ntBASIC20.39■□□□□ 0.85
PCDHA9Q9Y5H5 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.39■□□□□ 0.85
PCDHA9Q9Y5H5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHA9Q9Y5H5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms