Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA6Q9Y5G7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 CDCA4P2-201ENST00000441182 718 ntBASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 AC073111.5-205ENST00000641717 521 ntBASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDHGA6Q9Y5G7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 HLA-L-209ENST00000420110 1011 ntBASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA6Q9Y5G7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 BID-214ENST00000617586 542 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 C11orf96-202ENST00000528572 1834 ntBASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDHGA6Q9Y5G7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 AC092053.2-201ENST00000640557 1818 ntBASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 KRT18P11-201ENST00000435214 1283 ntBASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA6Q9Y5G7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 AC026185.1-201ENST00000445748 174 ntBASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHGA6Q9Y5G7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA6Q9Y5G7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA6Q9Y5G7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms