Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.23■■■□□ 2.43
NRXN3Q9Y4C0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC30.23■■■□□ 2.43
NRXN3Q9Y4C0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC30.23■■■□□ 2.43
NRXN3Q9Y4C0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
NRXN3Q9Y4C0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
NRXN3Q9Y4C0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
NRXN3Q9Y4C0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
NRXN3Q9Y4C0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 ESRRAP1-201ENST00000400596 1257 ntBASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 UNC93B5-201ENST00000530315 699 ntBASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NRXN3Q9Y4C0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
NRXN3Q9Y4C0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
NRXN3Q9Y4C0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
NRXN3Q9Y4C0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
NRXN3Q9Y4C0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
NRXN3Q9Y4C0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
NRXN3Q9Y4C0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC30.2■■■□□ 2.43
NRXN3Q9Y4C0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.2■■■□□ 2.43
NRXN3Q9Y4C0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
NRXN3Q9Y4C0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
NRXN3Q9Y4C0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
NRXN3Q9Y4C0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.2■■■□□ 2.42
NRXN3Q9Y4C0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 AC006058.3-201ENST00000606217 1069 ntBASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 AC243732.1-201ENST00000612648 864 ntBASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NRXN3Q9Y4C0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC30.18■■■□□ 2.42
NRXN3Q9Y4C0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NRXN3Q9Y4C0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NRXN3Q9Y4C0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
NRXN3Q9Y4C0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC30.17■■■□□ 2.42
NRXN3Q9Y4C0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.17■■■□□ 2.42
NRXN3Q9Y4C0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
NRXN3Q9Y4C0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC30.17■■■□□ 2.42
NRXN3Q9Y4C0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NRXN3Q9Y4C0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 AL596275.1-201ENST00000423464 877 ntBASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 AC008694.1-202ENST00000636953 945 ntBASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NRXN3Q9Y4C0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NRXN3Q9Y4C0 AC097658.1-201ENST00000475555 843 ntBASIC30.15■■■□□ 2.42
NRXN3Q9Y4C0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC30.15■■■□□ 2.42
NRXN3Q9Y4C0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC30.15■■■□□ 2.42
NRXN3Q9Y4C0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NRXN3Q9Y4C0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC30.15■■■□□ 2.42
NRXN3Q9Y4C0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
NRXN3Q9Y4C0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NRXN3Q9Y4C0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 AP003097.1-201ENST00000530657 1135 ntBASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms