Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP2BQ9UQN3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2BQ9UQN3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 AL121603.2-201ENST00000557373 2117 ntBASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 SLC47A1P1-202ENST00000449666 945 ntBASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 AP004607.7-201ENST00000527152 1677 ntBASIC21.58■■□□□ 1.05
CHMP2BQ9UQN3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CHMP2BQ9UQN3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 AC003102.1-202ENST00000563394 1796 ntBASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 AL138724.1-201ENST00000606771 1088 ntBASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2BQ9UQN3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 AL034346.1-201ENST00000568244 1277 ntBASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 AC136469.2-201ENST00000623944 1028 ntBASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 RNF165-205ENST00000588679 2904 ntBASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 AL157384.1-201ENST00000445995 2473 ntBASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2BQ9UQN3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2BQ9UQN3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHMP2BQ9UQN3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms