Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 SNORA78-201ENST00000459373 127 ntBASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
ZC3H4Q9UPT8 AL353803.4-201ENST00000565882 1934 ntBASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 AL591742.1-201ENST00000604433 565 ntBASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZC3H4Q9UPT8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 AC060766.5-201ENST00000590539 871 ntBASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 CYP2T3P-201ENST00000601990 817 ntBASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 Z99916.2-201ENST00000604037 246 ntBASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZC3H4Q9UPT8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 AC120498.10-201ENST00000621827 505 ntBASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZC3H4Q9UPT8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.95■■□□□ 1.75
ZC3H4Q9UPT8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
ZC3H4Q9UPT8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
ZC3H4Q9UPT8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 KRT18P21-201ENST00000515767 1272 ntBASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 HLA-B-256ENST00000639848 1089 ntBASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZC3H4Q9UPT8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 C1QBPP2-201ENST00000528754 825 ntBASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 BX088651.1-201ENST00000540551 451 ntBASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ZC3H4Q9UPT8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZC3H4Q9UPT8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.92■■□□□ 1.74
ZC3H4Q9UPT8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.92■■□□□ 1.74
ZC3H4Q9UPT8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
ZC3H4Q9UPT8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms