Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCM2LQ9NUG4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCM2LQ9NUG4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 UNC93B3-201ENST00000308076 687 ntBASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCM2LQ9NUG4 AC026471.6-201ENST00000622954 1905 ntBASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 AC005703.6-201ENST00000623265 1329 ntBASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCM2LQ9NUG4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.82
CCM2LQ9NUG4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CCM2LQ9NUG4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCM2LQ9NUG4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCM2LQ9NUG4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CCM2LQ9NUG4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.14■□□□□ 0.81
CCM2LQ9NUG4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.14■□□□□ 0.81
CCM2LQ9NUG4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCM2LQ9NUG4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCM2LQ9NUG4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCM2LQ9NUG4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 SUDS3P1-201ENST00000505831 966 ntBASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 AL136162.1-201ENST00000607711 1078 ntBASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCM2LQ9NUG4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCM2LQ9NUG4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.12■□□□□ 0.81
CCM2LQ9NUG4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCM2LQ9NUG4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCM2LQ9NUG4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCM2LQ9NUG4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms