Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 RPS2P52-201ENST00000469610 820 ntBASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.89■■□□□ 1.25
RC3H2Q9HBD1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H2Q9HBD1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 AC137767.1-201ENST00000602918 1920 ntBASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 RBM17P2-201ENST00000616397 1405 ntBASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H2Q9HBD1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 POU5F1P4-201ENST00000413175 1085 ntBASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 AC091874.3-201ENST00000512672 1195 ntBASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 AC008175.2-201ENST00000612840 297 ntBASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H2Q9HBD1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 KRT16P2-201ENST00000414673 1423 ntBASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 AC010980.2-201ENST00000587099 1412 ntBASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H2Q9HBD1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 GCSHP5-201ENST00000443090 522 ntBASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 AC120498.10-201ENST00000621827 505 ntBASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H2Q9HBD1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 DUSP5P2-201ENST00000426873 1033 ntBASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 AC097658.1-201ENST00000475555 843 ntBASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 AC243732.1-201ENST00000612648 864 ntBASIC22.83■■□□□ 1.25
RC3H2Q9HBD1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
RC3H2Q9HBD1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 AC087742.1-201ENST00000575880 1738 ntBASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 ESRRAP1-201ENST00000400596 1257 ntBASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
RC3H2Q9HBD1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms