Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 MIR935-201ENST00000401179 91 ntBASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A2Q9H9S3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SEC61A2Q9H9S3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SEC61A2Q9H9S3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SEC61A2Q9H9S3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
SEC61A2Q9H9S3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 AC010542.4-201ENST00000563151 1910 ntBASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SEC61A2Q9H9S3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A2Q9H9S3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 IRS3P-201ENST00000223076 1006 ntBASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A2Q9H9S3 AP004607.7-201ENST00000527152 1677 ntBASIC18.98■□□□□ 0.63
SEC61A2Q9H9S3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.98■□□□□ 0.63
SEC61A2Q9H9S3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A2Q9H9S3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.98■□□□□ 0.63
SEC61A2Q9H9S3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.98■□□□□ 0.63
SEC61A2Q9H9S3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A2Q9H9S3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A2Q9H9S3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A2Q9H9S3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.97■□□□□ 0.63
SEC61A2Q9H9S3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.96■□□□□ 0.63
SEC61A2Q9H9S3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms