Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.37■■□□□ 1.01
CLPBQ9H078 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.37■■□□□ 1.01
CLPBQ9H078 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLPBQ9H078 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.37■■□□□ 1.01
CLPBQ9H078 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.37■■□□□ 1.01
CLPBQ9H078 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.37■■□□□ 1.01
CLPBQ9H078 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
CLPBQ9H078 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLPBQ9H078 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLPBQ9H078 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLPBQ9H078 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLPBQ9H078 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLPBQ9H078 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CLPBQ9H078 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.36■■□□□ 1.01
CLPBQ9H078 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
CLPBQ9H078 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.36■■□□□ 1.01
CLPBQ9H078 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.36■■□□□ 1.01
CLPBQ9H078 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.36■■□□□ 1.01
CLPBQ9H078 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.36■■□□□ 1.01
CLPBQ9H078 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.36■■□□□ 1.01
CLPBQ9H078 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.36■■□□□ 1.01
CLPBQ9H078 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.36■■□□□ 1.01
CLPBQ9H078 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPBQ9H078 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CLPBQ9H078 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CLPBQ9H078 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CLPBQ9H078 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPBQ9H078 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.34■■□□□ 1.01
CLPBQ9H078 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.34■■□□□ 1.01
CLPBQ9H078 AP004607.4-201ENST00000530158 1459 ntBASIC21.34■■□□□ 1.01
CLPBQ9H078 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CLPBQ9H078 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.34■■□□□ 1.01
CLPBQ9H078 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.34■■□□□ 1.01
CLPBQ9H078 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CLPBQ9H078 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CLPBQ9H078 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 LINC00565-201ENST00000562710 2331 ntBASIC21.34■■□□□ 1.01
CLPBQ9H078 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPBQ9H078 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CLPBQ9H078 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPBQ9H078 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CLPBQ9H078 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLPBQ9H078 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLPBQ9H078 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPBQ9H078 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPBQ9H078 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.33■■□□□ 1.01
CLPBQ9H078 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPBQ9H078 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.33■■□□□ 1.01
CLPBQ9H078 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CLPBQ9H078 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.33■■□□□ 1.01
CLPBQ9H078 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLPBQ9H078 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLPBQ9H078 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CLPBQ9H078 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLPBQ9H078 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.32■■□□□ 1
CLPBQ9H078 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPBQ9H078 FAM99A-202ENST00000538190 1989 ntBASIC21.32■■□□□ 1
CLPBQ9H078 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPBQ9H078 AC004854.2-201ENST00000608450 1441 ntBASIC21.32■■□□□ 1
CLPBQ9H078 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPBQ9H078 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.32■■□□□ 1
CLPBQ9H078 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.32■■□□□ 1
CLPBQ9H078 AL034346.1-201ENST00000568244 1277 ntBASIC21.32■■□□□ 1
CLPBQ9H078 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.32■■□□□ 1
CLPBQ9H078 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.32■■□□□ 1
CLPBQ9H078 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CLPBQ9H078 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.32■■□□□ 1
CLPBQ9H078 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.32■■□□□ 1
CLPBQ9H078 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms