Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
LRFN3Q9BTN0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 KRT17P1-201ENST00000399211 1546 ntBASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 AC092368.3-202ENST00000574180 1591 ntBASIC21.57■■□□□ 1.04
LRFN3Q9BTN0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 AL135905.2-201ENST00000584934 1404 ntBASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.56■■□□□ 1.04
LRFN3Q9BTN0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 SOX15-203ENST00000570788 1093 ntBASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 AC005363.2-201ENST00000618631 242 ntBASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN3Q9BTN0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 AC092803.2-201ENST00000564287 1899 ntBASIC21.54■■□□□ 1.04
LRFN3Q9BTN0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 MMP23A-201ENST00000234610 1017 ntBASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 AC005521.1-201ENST00000393351 872 ntBASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN3Q9BTN0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 NTF6B-201ENST00000591913 560 ntBASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN3Q9BTN0 AC139426.1-201ENST00000568218 2529 ntBASIC21.52■■□□□ 1.03
LRFN3Q9BTN0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 POM121L13P-201ENST00000422362 380 ntBASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 AL355472.2-201ENST00000422958 438 ntBASIC21.51■■□□□ 1.03
LRFN3Q9BTN0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms