Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 RBM17P2-201ENST00000616397 1405 ntBASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRAMP1Q96RY5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 RARRES2P4-201ENST00000514074 484 ntBASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 KRT16P2-201ENST00000414673 1423 ntBASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CRAMP1Q96RY5 AC137767.1-201ENST00000602918 1920 ntBASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 AL591742.1-201ENST00000604433 565 ntBASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CRAMP1Q96RY5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 AC243732.1-201ENST00000612648 864 ntBASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.26■■□□□ 1.79
CRAMP1Q96RY5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 AC010980.2-201ENST00000587099 1412 ntBASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 AC091874.3-201ENST00000512672 1195 ntBASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CRAMP1Q96RY5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 AC098590.1-201ENST00000468126 897 ntBASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CRAMP1Q96RY5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 AC087742.1-201ENST00000575880 1738 ntBASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 ESRRAP1-201ENST00000400596 1257 ntBASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 RPS2P52-201ENST00000469610 820 ntBASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.23■■□□□ 1.79
CRAMP1Q96RY5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 DUSP5P2-201ENST00000426873 1033 ntBASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.22■■□□□ 1.79
CRAMP1Q96RY5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CRAMP1Q96RY5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CRAMP1Q96RY5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CRAMP1Q96RY5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.21■■□□□ 1.79
CRAMP1Q96RY5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.21■■□□□ 1.79
CRAMP1Q96RY5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CRAMP1Q96RY5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms