Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3IPQ96QF0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 LINC01529-204ENST00000636474 1715 ntBASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3IPQ96QF0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3IPQ96QF0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 AL049796.1-201ENST00000565336 1766 ntBASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB3IPQ96QF0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 AC009086.3-201ENST00000623486 1008 ntBASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RAB3IPQ96QF0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB3IPQ96QF0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 472 ms