Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
DUX3Q96PT4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.5■□□□□ 0.23
DUX3Q96PT4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DUX3Q96PT4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DUX3Q96PT4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DUX3Q96PT4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DUX3Q96PT4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DUX3Q96PT4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.5■□□□□ 0.23
DUX3Q96PT4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
DUX3Q96PT4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.5■□□□□ 0.23
DUX3Q96PT4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.5■□□□□ 0.23
DUX3Q96PT4 AC011767.1-201ENST00000617410 1153 ntBASIC16.5■□□□□ 0.23
DUX3Q96PT4 BID-214ENST00000617586 542 ntTSL 5 BASIC16.5■□□□□ 0.23
DUX3Q96PT4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DUX3Q96PT4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DUX3Q96PT4 AC055733.4-201ENST00000638462 1354 ntBASIC16.5■□□□□ 0.23
DUX3Q96PT4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DUX3Q96PT4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 AC073111.5-205ENST00000641717 521 ntBASIC16.49■□□□□ 0.23
DUX3Q96PT4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 AC139530.1-201ENST00000575312 1977 ntBASIC16.49■□□□□ 0.23
DUX3Q96PT4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
DUX3Q96PT4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DUX3Q96PT4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DUX3Q96PT4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DUX3Q96PT4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
DUX3Q96PT4 CDCA4P2-201ENST00000441182 718 ntBASIC16.47■□□□□ 0.23
DUX3Q96PT4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.47■□□□□ 0.23
DUX3Q96PT4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.47■□□□□ 0.23
DUX3Q96PT4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DUX3Q96PT4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DUX3Q96PT4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
DUX3Q96PT4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DUX3Q96PT4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DUX3Q96PT4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DUX3Q96PT4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DUX3Q96PT4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.46■□□□□ 0.23
DUX3Q96PT4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DUX3Q96PT4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.46■□□□□ 0.23
DUX3Q96PT4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DUX3Q96PT4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
DUX3Q96PT4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DUX3Q96PT4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DUX3Q96PT4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DUX3Q96PT4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.45■□□□□ 0.22
DUX3Q96PT4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DUX3Q96PT4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DUX3Q96PT4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms