Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.49■■□□□ 1.19
TRIM11Q96F44 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM11Q96F44 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM11Q96F44 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM11Q96F44 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM11Q96F44 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM11Q96F44 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM11Q96F44 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
TRIM11Q96F44 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM11Q96F44 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.48■■□□□ 1.19
TRIM11Q96F44 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.48■■□□□ 1.19
TRIM11Q96F44 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TRIM11Q96F44 FEM1AP4-201ENST00000443167 1987 ntBASIC22.48■■□□□ 1.19
TRIM11Q96F44 AC009237.3-201ENST00000393279 1427 ntBASIC22.48■■□□□ 1.19
TRIM11Q96F44 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.48■■□□□ 1.19
TRIM11Q96F44 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.47■■□□□ 1.19
TRIM11Q96F44 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
TRIM11Q96F44 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
TRIM11Q96F44 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.47■■□□□ 1.19
TRIM11Q96F44 AP001330.3-201ENST00000520123 633 ntBASIC22.47■■□□□ 1.19
TRIM11Q96F44 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TRIM11Q96F44 AL355001.2-201ENST00000620617 1191 ntBASIC22.47■■□□□ 1.19
TRIM11Q96F44 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM11Q96F44 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM11Q96F44 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM11Q96F44 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.46■■□□□ 1.19
TRIM11Q96F44 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM11Q96F44 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM11Q96F44 TSPY26P-201ENST00000476365 1326 ntBASIC22.46■■□□□ 1.19
TRIM11Q96F44 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.46■■□□□ 1.19
TRIM11Q96F44 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM11Q96F44 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TRIM11Q96F44 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
TRIM11Q96F44 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.45■■□□□ 1.19
TRIM11Q96F44 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
TRIM11Q96F44 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM11Q96F44 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
TRIM11Q96F44 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM11Q96F44 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM11Q96F44 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TRIM11Q96F44 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.45■■□□□ 1.18
TRIM11Q96F44 AC105233.4-201ENST00000642045 216 ntBASIC22.45■■□□□ 1.18
TRIM11Q96F44 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM11Q96F44 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM11Q96F44 RASA4CP-201ENST00000424092 1398 ntBASIC22.45■■□□□ 1.18
TRIM11Q96F44 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM11Q96F44 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM11Q96F44 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM11Q96F44 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM11Q96F44 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM11Q96F44 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.44■■□□□ 1.18
TRIM11Q96F44 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM11Q96F44 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.44■■□□□ 1.18
TRIM11Q96F44 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.44■■□□□ 1.18
TRIM11Q96F44 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
TRIM11Q96F44 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM11Q96F44 AC110285.6-201ENST00000617652 491 ntBASIC22.44■■□□□ 1.18
TRIM11Q96F44 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM11Q96F44 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.43■■□□□ 1.18
TRIM11Q96F44 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.43■■□□□ 1.18
TRIM11Q96F44 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.43■■□□□ 1.18
TRIM11Q96F44 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
TRIM11Q96F44 AC091305.1-201ENST00000479476 895 ntBASIC22.43■■□□□ 1.18
TRIM11Q96F44 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.43■■□□□ 1.18
TRIM11Q96F44 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.43■■□□□ 1.18
TRIM11Q96F44 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM11Q96F44 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM11Q96F44 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM11Q96F44 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM11Q96F44 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms