Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 AC026271.2-201ENST00000428091 497 ntBASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CTHRC1Q96CG8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.79■□□□□ 0.76
CTHRC1Q96CG8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 CCDC92B-201ENST00000575506 885 ntBASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTHRC1Q96CG8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 EEF1DP3-203ENST00000566025 782 ntBASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTHRC1Q96CG8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CTHRC1Q96CG8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 AC097381.1-201ENST00000429019 1296 ntBASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 AC079140.4-201ENST00000507448 529 ntBASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 MIR6821-201ENST00000617625 74 ntBASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTHRC1Q96CG8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 AC053503.5-201ENST00000601508 636 ntBASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.75■□□□□ 0.75
CTHRC1Q96CG8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms