Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ZNF428Q96B54 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.46■■□□□ 1.99
ZNF428Q96B54 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.46■■□□□ 1.99
ZNF428Q96B54 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.46■■□□□ 1.99
ZNF428Q96B54 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.46■■□□□ 1.99
ZNF428Q96B54 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ZNF428Q96B54 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
ZNF428Q96B54 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ZNF428Q96B54 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
ZNF428Q96B54 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
ZNF428Q96B54 AC026471.6-201ENST00000622954 1905 ntBASIC27.45■■□□□ 1.99
ZNF428Q96B54 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
ZNF428Q96B54 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.45■■□□□ 1.98
ZNF428Q96B54 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ZNF428Q96B54 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.45■■□□□ 1.98
ZNF428Q96B54 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.45■■□□□ 1.98
ZNF428Q96B54 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.45■■□□□ 1.98
ZNF428Q96B54 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC27.45■■□□□ 1.98
ZNF428Q96B54 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ZNF428Q96B54 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ZNF428Q96B54 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ZNF428Q96B54 AC010542.4-201ENST00000563151 1910 ntBASIC27.45■■□□□ 1.98
ZNF428Q96B54 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC27.45■■□□□ 1.98
ZNF428Q96B54 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ZNF428Q96B54 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ZNF428Q96B54 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.44■■□□□ 1.98
ZNF428Q96B54 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ZNF428Q96B54 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZNF428Q96B54 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZNF428Q96B54 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.44■■□□□ 1.98
ZNF428Q96B54 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.44■■□□□ 1.98
ZNF428Q96B54 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.44■■□□□ 1.98
ZNF428Q96B54 AC003102.1-202ENST00000563394 1796 ntBASIC27.44■■□□□ 1.98
ZNF428Q96B54 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.44■■□□□ 1.98
ZNF428Q96B54 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ZNF428Q96B54 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
ZNF428Q96B54 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ZNF428Q96B54 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC27.43■■□□□ 1.98
ZNF428Q96B54 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC27.43■■□□□ 1.98
ZNF428Q96B54 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZNF428Q96B54 LINC00565-201ENST00000562710 2331 ntBASIC27.43■■□□□ 1.98
ZNF428Q96B54 VPS53-216ENST00000574029 585 ntTSL 4 BASIC27.43■■□□□ 1.98
ZNF428Q96B54 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC27.43■■□□□ 1.98
ZNF428Q96B54 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
ZNF428Q96B54 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ZNF428Q96B54 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.43■■□□□ 1.98
ZNF428Q96B54 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.43■■□□□ 1.98
ZNF428Q96B54 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZNF428Q96B54 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZNF428Q96B54 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.42■■□□□ 1.98
ZNF428Q96B54 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.42■■□□□ 1.98
ZNF428Q96B54 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.42■■□□□ 1.98
ZNF428Q96B54 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZNF428Q96B54 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC27.42■■□□□ 1.98
ZNF428Q96B54 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.41■■□□□ 1.98
ZNF428Q96B54 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC27.41■■□□□ 1.98
ZNF428Q96B54 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZNF428Q96B54 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZNF428Q96B54 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC27.41■■□□□ 1.98
ZNF428Q96B54 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZNF428Q96B54 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC27.41■■□□□ 1.98
ZNF428Q96B54 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.41■■□□□ 1.98
ZNF428Q96B54 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZNF428Q96B54 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.41■■□□□ 1.98
ZNF428Q96B54 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
ZNF428Q96B54 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC27.41■■□□□ 1.98
ZNF428Q96B54 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZNF428Q96B54 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.4■■□□□ 1.98
ZNF428Q96B54 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZNF428Q96B54 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.4■■□□□ 1.98
ZNF428Q96B54 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.4■■□□□ 1.98
ZNF428Q96B54 AC137761.2-201ENST00000561729 223 ntBASIC27.4■■□□□ 1.98
ZNF428Q96B54 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.4■■□□□ 1.98
ZNF428Q96B54 AC145350.3-201ENST00000569033 163 ntBASIC27.4■■□□□ 1.98
ZNF428Q96B54 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZNF428Q96B54 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC27.4■■□□□ 1.98
ZNF428Q96B54 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ZNF428Q96B54 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
ZNF428Q96B54 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
ZNF428Q96B54 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.39■■□□□ 1.98
ZNF428Q96B54 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ZNF428Q96B54 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.39■■□□□ 1.98
ZNF428Q96B54 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.39■■□□□ 1.98
ZNF428Q96B54 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ZNF428Q96B54 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ZNF428Q96B54 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.39■■□□□ 1.97
ZNF428Q96B54 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
ZNF428Q96B54 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.38■■□□□ 1.97
ZNF428Q96B54 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
ZNF428Q96B54 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC27.38■■□□□ 1.97
ZNF428Q96B54 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.38■■□□□ 1.97
ZNF428Q96B54 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms