Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP7Q93009 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP7Q93009 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP7Q93009 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP7Q93009 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
USP7Q93009 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP7Q93009 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.99■□□□□ 0.95
USP7Q93009 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP7Q93009 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP7Q93009 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.99■□□□□ 0.95
USP7Q93009 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP7Q93009 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP7Q93009 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.99■□□□□ 0.95
USP7Q93009 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
USP7Q93009 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
USP7Q93009 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP7Q93009 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.98■□□□□ 0.95
USP7Q93009 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP7Q93009 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.98■□□□□ 0.95
USP7Q93009 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
USP7Q93009 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.98■□□□□ 0.95
USP7Q93009 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP7Q93009 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.98■□□□□ 0.95
USP7Q93009 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
USP7Q93009 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP7Q93009 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP7Q93009 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP7Q93009 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
USP7Q93009 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
USP7Q93009 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.97■□□□□ 0.95
USP7Q93009 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.97■□□□□ 0.95
USP7Q93009 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.97■□□□□ 0.95
USP7Q93009 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
USP7Q93009 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP7Q93009 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
USP7Q93009 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
USP7Q93009 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.96■□□□□ 0.95
USP7Q93009 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.96■□□□□ 0.95
USP7Q93009 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
USP7Q93009 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP7Q93009 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.96■□□□□ 0.95
USP7Q93009 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
USP7Q93009 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 AC016769.1-201ENST00000409132 1010 ntBASIC20.95■□□□□ 0.94
USP7Q93009 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.95■□□□□ 0.94
USP7Q93009 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.95■□□□□ 0.94
USP7Q93009 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.95■□□□□ 0.94
USP7Q93009 KRT18P61-201ENST00000585825 1298 ntBASIC20.95■□□□□ 0.94
USP7Q93009 AC080038.1-201ENST00000611274 1154 ntBASIC20.95■□□□□ 0.94
USP7Q93009 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.95■□□□□ 0.94
USP7Q93009 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USP7Q93009 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.95■□□□□ 0.94
USP7Q93009 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP7Q93009 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.94■□□□□ 0.94
USP7Q93009 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
USP7Q93009 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
USP7Q93009 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 AC137761.2-201ENST00000561729 223 ntBASIC20.94■□□□□ 0.94
USP7Q93009 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.94■□□□□ 0.94
USP7Q93009 AC145350.3-201ENST00000569033 163 ntBASIC20.94■□□□□ 0.94
USP7Q93009 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.94■□□□□ 0.94
USP7Q93009 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.94■□□□□ 0.94
USP7Q93009 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 FBXW4P1-201ENST00000426721 2239 ntBASIC20.94■□□□□ 0.94
USP7Q93009 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP7Q93009 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms