Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMARCC1Q92922 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMARCC1Q92922 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SMARCC1Q92922 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC27.47■■□□□ 1.99
SMARCC1Q92922 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.47■■□□□ 1.99
SMARCC1Q92922 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.47■■□□□ 1.99
SMARCC1Q92922 AC006058.3-201ENST00000606217 1069 ntBASIC27.47■■□□□ 1.99
SMARCC1Q92922 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
SMARCC1Q92922 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMARCC1Q92922 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCC1Q92922 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCC1Q92922 BAALC-201ENST00000297574 801 ntTSL 3 BASIC27.46■■□□□ 1.99
SMARCC1Q92922 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCC1Q92922 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27.46■■□□□ 1.99
SMARCC1Q92922 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC27.46■■□□□ 1.99
SMARCC1Q92922 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.46■■□□□ 1.99
SMARCC1Q92922 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCC1Q92922 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SMARCC1Q92922 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SMARCC1Q92922 KRT16P2-201ENST00000414673 1423 ntBASIC27.45■■□□□ 1.98
SMARCC1Q92922 RBM17P2-201ENST00000616397 1405 ntBASIC27.45■■□□□ 1.98
SMARCC1Q92922 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCC1Q92922 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCC1Q92922 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCC1Q92922 AC128676.1-201ENST00000454392 318 ntBASIC27.45■■□□□ 1.98
SMARCC1Q92922 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC27.45■■□□□ 1.98
SMARCC1Q92922 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.45■■□□□ 1.98
SMARCC1Q92922 AC142381.4-202ENST00000563973 229 ntBASIC27.45■■□□□ 1.98
SMARCC1Q92922 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.45■■□□□ 1.98
SMARCC1Q92922 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC27.44■■□□□ 1.98
SMARCC1Q92922 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC1Q92922 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.44■■□□□ 1.98
SMARCC1Q92922 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC1Q92922 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC1Q92922 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC1Q92922 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC1Q92922 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
SMARCC1Q92922 AL158047.1-201ENST00000445918 881 ntBASIC27.44■■□□□ 1.98
SMARCC1Q92922 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC27.44■■□□□ 1.98
SMARCC1Q92922 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.44■■□□□ 1.98
SMARCC1Q92922 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27.44■■□□□ 1.98
SMARCC1Q92922 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.44■■□□□ 1.98
SMARCC1Q92922 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC1Q92922 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC1Q92922 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC1Q92922 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC1Q92922 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
SMARCC1Q92922 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.43■■□□□ 1.98
SMARCC1Q92922 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.43■■□□□ 1.98
SMARCC1Q92922 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC1Q92922 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.43■■□□□ 1.98
SMARCC1Q92922 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.43■■□□□ 1.98
SMARCC1Q92922 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.43■■□□□ 1.98
SMARCC1Q92922 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC27.43■■□□□ 1.98
SMARCC1Q92922 AC243732.1-201ENST00000612648 864 ntBASIC27.43■■□□□ 1.98
SMARCC1Q92922 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.43■■□□□ 1.98
SMARCC1Q92922 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC1Q92922 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMARCC1Q92922 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
SMARCC1Q92922 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.42■■□□□ 1.98
SMARCC1Q92922 PBX1-209ENST00000485769 834 ntTSL 2 BASIC27.42■■□□□ 1.98
SMARCC1Q92922 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
SMARCC1Q92922 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC27.42■■□□□ 1.98
SMARCC1Q92922 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.42■■□□□ 1.98
SMARCC1Q92922 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMARCC1Q92922 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMARCC1Q92922 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SMARCC1Q92922 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.41■■□□□ 1.98
SMARCC1Q92922 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.41■■□□□ 1.98
SMARCC1Q92922 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
SMARCC1Q92922 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
SMARCC1Q92922 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC1Q92922 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.4■■□□□ 1.98
SMARCC1Q92922 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC1Q92922 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC1Q92922 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC1Q92922 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.4■■□□□ 1.98
SMARCC1Q92922 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC1Q92922 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.4■■□□□ 1.98
SMARCC1Q92922 RPS2P4-201ENST00000476944 856 ntBASIC27.4■■□□□ 1.98
SMARCC1Q92922 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.4■■□□□ 1.98
SMARCC1Q92922 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMARCC1Q92922 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
SMARCC1Q92922 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SMARCC1Q92922 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC27.39■■□□□ 1.98
SMARCC1Q92922 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.39■■□□□ 1.98
SMARCC1Q92922 AL596275.1-201ENST00000423464 877 ntBASIC27.39■■□□□ 1.98
SMARCC1Q92922 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.39■■□□□ 1.98
SMARCC1Q92922 AC026366.1-201ENST00000488803 879 ntBASIC27.39■■□□□ 1.98
SMARCC1Q92922 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC27.39■■□□□ 1.98
SMARCC1Q92922 UNC93B5-201ENST00000530315 699 ntBASIC27.39■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms