Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.17■□□□□ 0.5
SMIM4Q8WVI0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 AC079089.2-201ENST00000531211 1277 ntBASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM4Q8WVI0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 AC006128.1-201ENST00000624704 1661 ntBASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 MIR4449-201ENST00000578365 66 ntBASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM4Q8WVI0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMIM4Q8WVI0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SMIM4Q8WVI0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms