Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 KRT19P1-201ENST00000405746 1186 ntBASIC19.36■□□□□ 0.69
RNF138Q8WVD3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF138Q8WVD3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF138Q8WVD3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF138Q8WVD3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF138Q8WVD3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF138Q8WVD3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF138Q8WVD3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF138Q8WVD3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF138Q8WVD3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF138Q8WVD3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF138Q8WVD3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF138Q8WVD3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF138Q8WVD3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF138Q8WVD3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF138Q8WVD3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RNF138Q8WVD3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 AP001160.3-201ENST00000601484 763 ntBASIC19.32■□□□□ 0.68
RNF138Q8WVD3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF138Q8WVD3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF138Q8WVD3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms