Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.35■■□□□ 1.81
RTL9Q8NET4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RTL9Q8NET4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTL9Q8NET4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.34■■□□□ 1.81
RTL9Q8NET4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.34■■□□□ 1.81
RTL9Q8NET4 AC066615.1-201ENST00000640911 628 ntBASIC26.34■■□□□ 1.81
RTL9Q8NET4 AC127496.7-201ENST00000625110 1798 ntBASIC26.34■■□□□ 1.81
RTL9Q8NET4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTL9Q8NET4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTL9Q8NET4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RTL9Q8NET4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTL9Q8NET4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTL9Q8NET4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTL9Q8NET4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
RTL9Q8NET4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
RTL9Q8NET4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTL9Q8NET4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
RTL9Q8NET4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTL9Q8NET4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.33■■□□□ 1.81
RTL9Q8NET4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTL9Q8NET4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RTL9Q8NET4 MIR4651-201ENST00000582622 73 ntBASIC26.33■■□□□ 1.81
RTL9Q8NET4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.33■■□□□ 1.81
RTL9Q8NET4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RTL9Q8NET4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTL9Q8NET4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.33■■□□□ 1.81
RTL9Q8NET4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTL9Q8NET4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTL9Q8NET4 POU5F1P4-201ENST00000413175 1085 ntBASIC26.33■■□□□ 1.8
RTL9Q8NET4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.33■■□□□ 1.8
RTL9Q8NET4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RTL9Q8NET4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RTL9Q8NET4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RTL9Q8NET4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RTL9Q8NET4 AC068338.2-201ENST00000563278 1430 ntBASIC26.32■■□□□ 1.8
RTL9Q8NET4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RTL9Q8NET4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RTL9Q8NET4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.32■■□□□ 1.8
RTL9Q8NET4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RTL9Q8NET4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.32■■□□□ 1.8
RTL9Q8NET4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.32■■□□□ 1.8
RTL9Q8NET4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 KRT16P2-201ENST00000414673 1423 ntBASIC26.31■■□□□ 1.8
RTL9Q8NET4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 CYP2T1P-201ENST00000432607 1285 ntBASIC26.31■■□□□ 1.8
RTL9Q8NET4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 AC008175.2-201ENST00000612840 297 ntBASIC26.31■■□□□ 1.8
RTL9Q8NET4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
RTL9Q8NET4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTL9Q8NET4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTL9Q8NET4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.3■■□□□ 1.8
RTL9Q8NET4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.3■■□□□ 1.8
RTL9Q8NET4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.3■■□□□ 1.8
RTL9Q8NET4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RTL9Q8NET4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTL9Q8NET4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTL9Q8NET4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RTL9Q8NET4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTL9Q8NET4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTL9Q8NET4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 AC069152.1-201ENST00000438030 544 ntBASIC26.29■■□□□ 1.8
RTL9Q8NET4 AF201337.1-201ENST00000520239 748 ntBASIC26.29■■□□□ 1.8
RTL9Q8NET4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.29■■□□□ 1.8
RTL9Q8NET4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RTL9Q8NET4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.28■■□□□ 1.8
RTL9Q8NET4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RTL9Q8NET4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTL9Q8NET4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.28■■□□□ 1.8
RTL9Q8NET4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.28■■□□□ 1.8
RTL9Q8NET4 AC098934.4-201ENST00000564127 592 ntBASIC26.28■■□□□ 1.8
RTL9Q8NET4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RTL9Q8NET4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RTL9Q8NET4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.27■■□□□ 1.8
RTL9Q8NET4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTL9Q8NET4 AC073210.2-201ENST00000430369 194 ntBASIC26.27■■□□□ 1.8
RTL9Q8NET4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms