Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.6■□□□□ 0.57
CPEB3Q8NE35 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 AC027612.3-201ENST00000413684 1047 ntBASIC18.6■□□□□ 0.57
CPEB3Q8NE35 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 TPRG1LP1-201ENST00000598702 760 ntBASIC18.6■□□□□ 0.57
CPEB3Q8NE35 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPEB3Q8NE35 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.59■□□□□ 0.57
CPEB3Q8NE35 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 AC055733.4-201ENST00000638462 1354 ntBASIC18.59■□□□□ 0.57
CPEB3Q8NE35 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 AC003102.1-202ENST00000563394 1796 ntBASIC18.59■□□□□ 0.57
CPEB3Q8NE35 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPEB3Q8NE35 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPEB3Q8NE35 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPEB3Q8NE35 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.58■□□□□ 0.57
CPEB3Q8NE35 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CPEB3Q8NE35 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPEB3Q8NE35 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPEB3Q8NE35 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPEB3Q8NE35 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms