Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 MTDHP2-201ENST00000601468 714 ntBASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71LQ8N9Z2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
CCDC71LQ8N9Z2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.64■□□□□ 0.42
CCDC71LQ8N9Z2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CCDC71LQ8N9Z2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71LQ8N9Z2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 AC026471.6-201ENST00000622954 1905 ntBASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC71LQ8N9Z2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 AC092028.1-203ENST00000608262 953 ntBASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 AL121603.2-201ENST00000557373 2117 ntBASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71LQ8N9Z2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 AC012354.3-201ENST00000623734 483 ntBASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 AC068587.7-201ENST00000641602 218 ntBASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC71LQ8N9Z2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms