Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 AC026185.1-201ENST00000445748 174 ntBASIC19.7■□□□□ 0.74
BEST3Q8N1M1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.7■□□□□ 0.74
BEST3Q8N1M1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 AP001160.3-201ENST00000601484 763 ntBASIC19.69■□□□□ 0.74
BEST3Q8N1M1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 AP006587.3-201ENST00000525742 1516 ntBASIC19.69■□□□□ 0.74
BEST3Q8N1M1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST3Q8N1M1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 UBE2DNL-204ENST00000602536 740 ntBASIC19.68■□□□□ 0.74
BEST3Q8N1M1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 C9orf163-202ENST00000624034 2573 ntBASIC19.68■□□□□ 0.74
BEST3Q8N1M1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST3Q8N1M1 AC139530.1-201ENST00000575312 1977 ntBASIC19.68■□□□□ 0.74
BEST3Q8N1M1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 AL117328.2-201ENST00000624617 1940 ntBASIC19.67■□□□□ 0.74
BEST3Q8N1M1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 MFSD11-216ENST00000590393 1141 ntBASIC19.67■□□□□ 0.74
BEST3Q8N1M1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.67■□□□□ 0.74
BEST3Q8N1M1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 HLA-L-209ENST00000420110 1011 ntBASIC19.66■□□□□ 0.74
BEST3Q8N1M1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.66■□□□□ 0.74
BEST3Q8N1M1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST3Q8N1M1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST3Q8N1M1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BEST3Q8N1M1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms