Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
ABCA6Q8N139 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC31.99■■■□□ 2.71
ABCA6Q8N139 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC31.98■■■□□ 2.71
ABCA6Q8N139 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC31.98■■■□□ 2.71
ABCA6Q8N139 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ABCA6Q8N139 OR2A1-AS1-201ENST00000462305 773 ntBASIC31.98■■■□□ 2.71
ABCA6Q8N139 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC31.98■■■□□ 2.71
ABCA6Q8N139 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
ABCA6Q8N139 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
ABCA6Q8N139 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ABCA6Q8N139 PEX7-202ENST00000367756 680 ntTSL 3 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 SERPINH1P1-201ENST00000419794 1249 ntBASIC31.97■■■□□ 2.71
ABCA6Q8N139 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ABCA6Q8N139 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC31.97■■■□□ 2.71
ABCA6Q8N139 OR7E47P-201ENST00000546390 1422 ntBASIC31.96■■■□□ 2.71
ABCA6Q8N139 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC31.96■■■□□ 2.71
ABCA6Q8N139 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
ABCA6Q8N139 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC31.96■■■□□ 2.71
ABCA6Q8N139 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ABCA6Q8N139 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
ABCA6Q8N139 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
ABCA6Q8N139 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
ABCA6Q8N139 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.95■■■□□ 2.71
ABCA6Q8N139 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ABCA6Q8N139 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ABCA6Q8N139 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC31.95■■■□□ 2.71
ABCA6Q8N139 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC31.95■■■□□ 2.71
ABCA6Q8N139 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
ABCA6Q8N139 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
ABCA6Q8N139 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ABCA6Q8N139 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
ABCA6Q8N139 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ABCA6Q8N139 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
ABCA6Q8N139 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ABCA6Q8N139 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC31.94■■■□□ 2.7
ABCA6Q8N139 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC31.94■■■□□ 2.7
ABCA6Q8N139 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC31.94■■■□□ 2.7
ABCA6Q8N139 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ABCA6Q8N139 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC31.94■■■□□ 2.7
ABCA6Q8N139 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.94■■■□□ 2.7
ABCA6Q8N139 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC31.94■■■□□ 2.7
ABCA6Q8N139 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ABCA6Q8N139 MME-217ENST00000616757 1315 ntTSL 5 BASIC31.94■■■□□ 2.7
ABCA6Q8N139 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ABCA6Q8N139 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC31.93■■■□□ 2.7
ABCA6Q8N139 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC31.93■■■□□ 2.7
ABCA6Q8N139 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC31.93■■■□□ 2.7
ABCA6Q8N139 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC31.93■■■□□ 2.7
ABCA6Q8N139 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 KRT16P2-201ENST00000414673 1423 ntBASIC31.93■■■□□ 2.7
ABCA6Q8N139 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC31.93■■■□□ 2.7
ABCA6Q8N139 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
ABCA6Q8N139 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.92■■■□□ 2.7
ABCA6Q8N139 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ABCA6Q8N139 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
ABCA6Q8N139 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC31.92■■■□□ 2.7
ABCA6Q8N139 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC31.92■■■□□ 2.7
ABCA6Q8N139 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC31.92■■■□□ 2.7
ABCA6Q8N139 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC31.92■■■□□ 2.7
ABCA6Q8N139 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC31.91■■■□□ 2.7
ABCA6Q8N139 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ABCA6Q8N139 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ABCA6Q8N139 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ABCA6Q8N139 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ABCA6Q8N139 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC31.9■■■□□ 2.7
ABCA6Q8N139 AC092068.2-201ENST00000590491 1708 ntBASIC31.9■■■□□ 2.7
ABCA6Q8N139 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA6Q8N139 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA6Q8N139 RNF121-214ENST00000533380 870 ntTSL 3 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 AC243732.1-201ENST00000612648 864 ntBASIC31.89■■■□□ 2.7
ABCA6Q8N139 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 KRT17P1-201ENST00000399211 1546 ntBASIC31.89■■■□□ 2.7
ABCA6Q8N139 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA6Q8N139 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC31.89■■■□□ 2.7
ABCA6Q8N139 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA6Q8N139 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ABCA6Q8N139 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms