Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 AC142381.2-201ENST00000566120 298 ntBASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.03■□□□□ 0.96
CPNE9Q8IYJ1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 AC026310.3-201ENST00000625186 2373 ntBASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 AP006587.3-201ENST00000525742 1516 ntBASIC21.02■□□□□ 0.96
CPNE9Q8IYJ1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.02■□□□□ 0.95
CPNE9Q8IYJ1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 AC104564.3-201ENST00000582367 638 ntBASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE9Q8IYJ1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 AC003102.1-202ENST00000563394 1796 ntBASIC21■□□□□ 0.95
CPNE9Q8IYJ1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 MIR572-201ENST00000384983 95 ntBASIC21■□□□□ 0.95
CPNE9Q8IYJ1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE9Q8IYJ1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 AC005837.3-201ENST00000612163 286 ntBASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE9Q8IYJ1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 Z98882.1-201ENST00000622160 2253 ntBASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE9Q8IYJ1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE9Q8IYJ1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE9Q8IYJ1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms