Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC104187.1-201ENST00000607510 612 ntBASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 EEF1DP3-203ENST00000566025 782 ntBASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 AC104564.3-201ENST00000582367 638 ntBASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
C9orf40Q8IXQ3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C9orf40Q8IXQ3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 AC022517.1-201ENST00000592429 346 ntBASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
C9orf40Q8IXQ3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 KRT19P1-201ENST00000405746 1186 ntBASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 AC053503.5-201ENST00000601508 636 ntBASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
C9orf40Q8IXQ3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.65■□□□□ 0.74
C9orf40Q8IXQ3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
C9orf40Q8IXQ3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
C9orf40Q8IXQ3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
C9orf40Q8IXQ3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
C9orf40Q8IXQ3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms