Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPAS4Q8IUM7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
NPAS4Q8IUM7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
NPAS4Q8IUM7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 KRT16P2-201ENST00000414673 1423 ntBASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 ITM2C-210ENST00000620962 501 ntBASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.94■■□□□ 1.26
NPAS4Q8IUM7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 BX276092.2-201ENST00000417668 665 ntBASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 AL162412.1-201ENST00000567129 965 ntBASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 AC008687.6-201ENST00000596318 630 ntBASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.93■■□□□ 1.26
NPAS4Q8IUM7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NPAS4Q8IUM7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.92■■□□□ 1.26
NPAS4Q8IUM7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NPAS4Q8IUM7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NPAS4Q8IUM7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.92■■□□□ 1.26
NPAS4Q8IUM7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.92■■□□□ 1.26
NPAS4Q8IUM7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.92■■□□□ 1.26
NPAS4Q8IUM7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 RBM17P2-201ENST00000616397 1405 ntBASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 KRT18P29-201ENST00000397031 1267 ntBASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NPAS4Q8IUM7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 AL591742.1-201ENST00000604433 565 ntBASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.9■■□□□ 1.26
NPAS4Q8IUM7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NPAS4Q8IUM7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
NPAS4Q8IUM7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NPAS4Q8IUM7 AC139530.1-201ENST00000575312 1977 ntBASIC22.89■■□□□ 1.26
NPAS4Q8IUM7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NPAS4Q8IUM7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NPAS4Q8IUM7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.89■■□□□ 1.25
NPAS4Q8IUM7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.89■■□□□ 1.25
NPAS4Q8IUM7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NPAS4Q8IUM7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms