Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.33■■□□□ 1.81
CHD1LQ86WJ1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CHD1LQ86WJ1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.33■■□□□ 1.81
CHD1LQ86WJ1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD1LQ86WJ1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CHD1LQ86WJ1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CHD1LQ86WJ1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.33■■□□□ 1.8
CHD1LQ86WJ1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 AL355001.2-201ENST00000620617 1191 ntBASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD1LQ86WJ1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 MIR939-201ENST00000401314 82 ntBASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.31■■□□□ 1.8
CHD1LQ86WJ1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 AF213884.3-201ENST00000563833 479 ntBASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD1LQ86WJ1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 AL136967.2-201ENST00000623968 743 ntBASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 RASA4CP-201ENST00000424092 1398 ntBASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CHD1LQ86WJ1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 AC105233.4-201ENST00000642045 216 ntBASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD1LQ86WJ1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHD1LQ86WJ1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.27■■□□□ 1.8
CHD1LQ86WJ1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1LQ86WJ1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD1LQ86WJ1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CHD1LQ86WJ1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.27■■□□□ 1.8
CHD1LQ86WJ1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHD1LQ86WJ1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD1LQ86WJ1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1LQ86WJ1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CHD1LQ86WJ1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHD1LQ86WJ1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms