Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 EEF1DP3-203ENST00000566025 782 ntBASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 IKBKGP1-201ENST00000612193 1073 ntBASIC20.91■□□□□ 0.94
LRRTM4Q86VH4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 AC003102.1-202ENST00000563394 1796 ntBASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 AC016769.1-201ENST00000409132 1010 ntBASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 AC053503.5-201ENST00000601508 636 ntBASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRTM4Q86VH4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM4Q86VH4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM4Q86VH4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM4Q86VH4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM4Q86VH4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM4Q86VH4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM4Q86VH4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRRTM4Q86VH4 AC026471.6-201ENST00000622954 1905 ntBASIC20.89■□□□□ 0.93
LRRTM4Q86VH4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.89■□□□□ 0.93
LRRTM4Q86VH4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.89■□□□□ 0.93
LRRTM4Q86VH4 AC138907.5-202ENST00000569484 235 ntBASIC20.89■□□□□ 0.93
LRRTM4Q86VH4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.89■□□□□ 0.93
LRRTM4Q86VH4 AL137784.2-201ENST00000607332 1000 ntBASIC20.89■□□□□ 0.93
LRRTM4Q86VH4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRTM4Q86VH4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRTM4Q86VH4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 AP001160.3-201ENST00000601484 763 ntBASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 AC092437.1-201ENST00000624794 1048 ntBASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRTM4Q86VH4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 AC010141.2-201ENST00000452426 721 ntBASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRTM4Q86VH4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 AC010542.4-201ENST00000563151 1910 ntBASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 AC006015.1-201ENST00000429970 570 ntBASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms