Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL55Q7Z7F7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 SERBP1P1-201ENST00000396021 1160 ntBASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL55Q7Z7F7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 OXCT2P1-201ENST00000447263 1535 ntBASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 AL034346.1-201ENST00000568244 1277 ntBASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 AC104564.3-201ENST00000582367 638 ntBASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 AC011298.3-201ENST00000615796 283 ntBASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 AC136469.2-201ENST00000623944 1028 ntBASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL55Q7Z7F7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 AC010525.1-201ENST00000585559 441 ntBASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 MIR4466-201ENST00000606121 54 ntBASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
MRPL55Q7Z7F7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms