Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 Z99916.2-201ENST00000604037 246 ntBASIC14.95□□□□□ -0.02
CSMD3Q7Z407 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 PREB-202ENST00000406567 1910 ntTSL 5 BASIC14.95□□□□□ -0.02
CSMD3Q7Z407 AC010980.2-201ENST00000587099 1412 ntBASIC14.95□□□□□ -0.02
CSMD3Q7Z407 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 AL162412.1-201ENST00000567129 965 ntBASIC14.94□□□□□ -0.02
CSMD3Q7Z407 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 AC016405.3-201ENST00000607710 860 ntBASIC14.94□□□□□ -0.02
CSMD3Q7Z407 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
CSMD3Q7Z407 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CSMD3Q7Z407 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 UBE2SP1-201ENST00000450587 669 ntBASIC14.92□□□□□ -0.02
CSMD3Q7Z407 AC097658.1-201ENST00000475555 843 ntBASIC14.92□□□□□ -0.02
CSMD3Q7Z407 BX088651.1-201ENST00000540551 451 ntBASIC14.92□□□□□ -0.02
CSMD3Q7Z407 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 AP004607.7-201ENST00000527152 1677 ntBASIC14.92□□□□□ -0.02
CSMD3Q7Z407 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.92□□□□□ -0.02
CSMD3Q7Z407 AC012306.2-201ENST00000609350 630 ntBASIC14.92□□□□□ -0.02
CSMD3Q7Z407 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD3Q7Z407 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD3Q7Z407 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD3Q7Z407 AC233263.1-201ENST00000578059 224 ntBASIC14.91□□□□□ -0.02
CSMD3Q7Z407 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD3Q7Z407 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD3Q7Z407 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms