Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.08■□□□□ 0.64
NHLRC1Q6VVB1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 AC012414.1-201ENST00000556676 535 ntBASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.07■□□□□ 0.64
NHLRC1Q6VVB1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NHLRC1Q6VVB1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 AC244015.2-201ENST00000616358 1861 ntBASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 AP006587.3-201ENST00000525742 1516 ntBASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.05■□□□□ 0.64
NHLRC1Q6VVB1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 AC003102.1-202ENST00000563394 1796 ntBASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 BX005040.4-201ENST00000637145 1518 ntBASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 AC055733.4-201ENST00000638462 1354 ntBASIC19.04■□□□□ 0.64
NHLRC1Q6VVB1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NHLRC1Q6VVB1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 AC009237.3-201ENST00000393279 1427 ntBASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NHLRC1Q6VVB1 AC105265.2-201ENST00000467189 838 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms