Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHC4Q6S5L8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHC4Q6S5L8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHC4Q6S5L8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.06■■□□□ 1.44
SHC4Q6S5L8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHC4Q6S5L8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHC4Q6S5L8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 PBX2P1-201ENST00000493219 1291 ntBASIC24.05■■□□□ 1.44
SHC4Q6S5L8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
SHC4Q6S5L8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC4Q6S5L8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC4Q6S5L8 AC099791.1-201ENST00000416440 715 ntBASIC24.04■■□□□ 1.44
SHC4Q6S5L8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SHC4Q6S5L8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.04■■□□□ 1.44
SHC4Q6S5L8 AC106739.1-201ENST00000617035 715 ntBASIC24.04■■□□□ 1.44
SHC4Q6S5L8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHC4Q6S5L8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SHC4Q6S5L8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
SHC4Q6S5L8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 AC110285.6-201ENST00000617652 491 ntBASIC24.03■■□□□ 1.44
SHC4Q6S5L8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHC4Q6S5L8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.02■■□□□ 1.44
SHC4Q6S5L8 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHC4Q6S5L8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 AP001330.3-201ENST00000520123 633 ntBASIC24.01■■□□□ 1.43
SHC4Q6S5L8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHC4Q6S5L8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24■■□□□ 1.43
SHC4Q6S5L8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SHC4Q6S5L8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24■■□□□ 1.43
SHC4Q6S5L8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SHC4Q6S5L8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
SHC4Q6S5L8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24■■□□□ 1.43
SHC4Q6S5L8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SHC4Q6S5L8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SHC4Q6S5L8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SHC4Q6S5L8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 AL031432.3-201ENST00000607698 485 ntBASIC23.99■■□□□ 1.43
SHC4Q6S5L8 TSPY26P-201ENST00000476365 1326 ntBASIC23.99■■□□□ 1.43
SHC4Q6S5L8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHC4Q6S5L8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms