Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.34■■□□□ 1.17
SYCE2Q6PIF2 AC006058.3-201ENST00000606217 1069 ntBASIC22.34■■□□□ 1.17
SYCE2Q6PIF2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYCE2Q6PIF2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.34■■□□□ 1.17
SYCE2Q6PIF2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYCE2Q6PIF2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYCE2Q6PIF2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.33■■□□□ 1.17
SYCE2Q6PIF2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SYCE2Q6PIF2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SYCE2Q6PIF2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SYCE2Q6PIF2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SYCE2Q6PIF2 AC128676.1-201ENST00000454392 318 ntBASIC22.33■■□□□ 1.17
SYCE2Q6PIF2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.33■■□□□ 1.17
SYCE2Q6PIF2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SYCE2Q6PIF2 ANOS2P-203ENST00000472227 1816 ntBASIC22.33■■□□□ 1.16
SYCE2Q6PIF2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.33■■□□□ 1.16
SYCE2Q6PIF2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SYCE2Q6PIF2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 AC142381.4-202ENST00000563973 229 ntBASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.32■■□□□ 1.16
SYCE2Q6PIF2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 AC010980.2-201ENST00000587099 1412 ntBASIC22.31■■□□□ 1.16
SYCE2Q6PIF2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE2Q6PIF2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 AC092068.2-201ENST00000590491 1708 ntBASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 RPS2P4-201ENST00000476944 856 ntBASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE2Q6PIF2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 AC120498.10-201ENST00000621827 505 ntBASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.28■■□□□ 1.16
SYCE2Q6PIF2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 AL162412.1-201ENST00000567129 965 ntBASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 AC008175.2-201ENST00000612840 297 ntBASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE2Q6PIF2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SYCE2Q6PIF2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SYCE2Q6PIF2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms