Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 AL591742.1-201ENST00000604433 565 ntBASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR3Q6P9H4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR3Q6P9H4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR3Q6P9H4 AC010980.2-201ENST00000587099 1412 ntBASIC23.11■■□□□ 1.29
CNKSR3Q6P9H4 RBM17P2-201ENST00000616397 1405 ntBASIC23.11■■□□□ 1.29
CNKSR3Q6P9H4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.11■■□□□ 1.29
CNKSR3Q6P9H4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
CNKSR3Q6P9H4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR3Q6P9H4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 KRT16P2-201ENST00000414673 1423 ntBASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR3Q6P9H4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR3Q6P9H4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 AC006058.3-201ENST00000606217 1069 ntBASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.08■■□□□ 1.29
CNKSR3Q6P9H4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CNKSR3Q6P9H4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 AC243732.1-201ENST00000612648 864 ntBASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CNKSR3Q6P9H4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 AC128676.1-201ENST00000454392 318 ntBASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CNKSR3Q6P9H4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 AL158047.1-201ENST00000445918 881 ntBASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 AC142381.4-202ENST00000563973 229 ntBASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CNKSR3Q6P9H4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms