Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.33■□□□□ 0.68
NIPAL3Q6P499 SUDS3P1-201ENST00000505831 966 ntBASIC19.33■□□□□ 0.68
NIPAL3Q6P499 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NIPAL3Q6P499 AL136967.2-201ENST00000623968 743 ntBASIC19.33■□□□□ 0.68
NIPAL3Q6P499 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NIPAL3Q6P499 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NIPAL3Q6P499 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NIPAL3Q6P499 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
NIPAL3Q6P499 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NIPAL3Q6P499 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 FEM1AP4-201ENST00000443167 1987 ntBASIC19.32■□□□□ 0.68
NIPAL3Q6P499 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.32■□□□□ 0.68
NIPAL3Q6P499 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 IGHV3-19-201ENST00000521488 291 ntBASIC19.31■□□□□ 0.68
NIPAL3Q6P499 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NIPAL3Q6P499 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 AF106564.1-201ENST00000607058 2553 ntBASIC19.3■□□□□ 0.68
NIPAL3Q6P499 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NIPAL3Q6P499 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 TSPY26P-201ENST00000476365 1326 ntBASIC19.29■□□□□ 0.68
NIPAL3Q6P499 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 AC079089.2-201ENST00000531211 1277 ntBASIC19.29■□□□□ 0.68
NIPAL3Q6P499 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 OXCT2P1-201ENST00000447263 1535 ntBASIC19.29■□□□□ 0.68
NIPAL3Q6P499 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.29■□□□□ 0.68
NIPAL3Q6P499 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 AC026471.6-201ENST00000622954 1905 ntBASIC19.28■□□□□ 0.68
NIPAL3Q6P499 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NIPAL3Q6P499 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NIPAL3Q6P499 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NIPAL3Q6P499 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NIPAL3Q6P499 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NIPAL3Q6P499 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NIPAL3Q6P499 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.27■□□□□ 0.68
NIPAL3Q6P499 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NIPAL3Q6P499 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms