Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 BHLHE23-202ENST00000612929 1109 ntBASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDPF1Q6NVV7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 DUX4L9-201ENST00000449051 1259 ntBASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 AC139795.1-202ENST00000500444 432 ntBASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 MIR6765-201ENST00000614092 87 ntBASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CDPF1Q6NVV7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 Z98882.1-201ENST00000622160 2253 ntBASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDPF1Q6NVV7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 NOC2LP1-202ENST00000452600 2235 ntBASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 AC018755.3-202ENST00000596210 929 ntBASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDPF1Q6NVV7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDPF1Q6NVV7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 AL133373.2-201ENST00000623187 2828 ntBASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 AL035685.1-201ENST00000636663 812 ntBASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.08■□□□□ 0.16
CDPF1Q6NVV7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms