Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF213Q63HN8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.57□□□□□ -0.56
RNF213Q63HN8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF213Q63HN8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC11.57□□□□□ -0.56
RNF213Q63HN8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF213Q63HN8 PVRIG2P-201ENST00000435460 978 ntBASIC11.57□□□□□ -0.56
RNF213Q63HN8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
RNF213Q63HN8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RNF213Q63HN8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC11.57□□□□□ -0.56
RNF213Q63HN8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF213Q63HN8 MMP23A-201ENST00000234610 1017 ntBASIC11.56□□□□□ -0.56
RNF213Q63HN8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 AL355472.2-201ENST00000422958 438 ntBASIC11.56□□□□□ -0.56
RNF213Q63HN8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 DUX4L26-201ENST00000489078 1255 ntBASIC11.56□□□□□ -0.56
RNF213Q63HN8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 PNMA6B-201ENST00000538162 1200 ntBASIC11.56□□□□□ -0.56
RNF213Q63HN8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF213Q63HN8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.56□□□□□ -0.56
RNF213Q63HN8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RNF213Q63HN8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RNF213Q63HN8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RNF213Q63HN8 SERPINH1P1-201ENST00000419794 1249 ntBASIC11.55□□□□□ -0.56
RNF213Q63HN8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RNF213Q63HN8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RNF213Q63HN8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RNF213Q63HN8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 AC005363.2-201ENST00000618631 242 ntBASIC11.55□□□□□ -0.56
RNF213Q63HN8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC11.55□□□□□ -0.56
RNF213Q63HN8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 MIR6089-201ENST00000616698 64 ntBASIC11.54□□□□□ -0.56
RNF213Q63HN8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 HLA-B-256ENST00000639848 1089 ntBASIC11.54□□□□□ -0.56
RNF213Q63HN8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RNF213Q63HN8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
RNF213Q63HN8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RNF213Q63HN8 AC009237.3-201ENST00000393279 1427 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms