Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CBWD3Q5JTY5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 TPRG1LP1-201ENST00000598702 760 ntBASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 AL358852.1-201ENST00000623174 1268 ntBASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CBWD3Q5JTY5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.02■■□□□ 1.28
CBWD3Q5JTY5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CBWD3Q5JTY5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CBWD3Q5JTY5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
CBWD3Q5JTY5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23■■□□□ 1.27
CBWD3Q5JTY5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CBWD3Q5JTY5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CBWD3Q5JTY5 NME4-202ENST00000382940 766 ntTSL 3 BASIC23■■□□□ 1.27
CBWD3Q5JTY5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CBWD3Q5JTY5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23■■□□□ 1.27
CBWD3Q5JTY5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23■■□□□ 1.27
CBWD3Q5JTY5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23■■□□□ 1.27
CBWD3Q5JTY5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23■■□□□ 1.27
CBWD3Q5JTY5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CBWD3Q5JTY5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CBWD3Q5JTY5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 ZNRF2P3-201ENST00000424200 374 ntBASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CBWD3Q5JTY5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.98■■□□□ 1.27
CBWD3Q5JTY5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 AF106564.1-201ENST00000607058 2553 ntBASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 AC005229.4-201ENST00000610085 2198 ntBASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CBWD3Q5JTY5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms