Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 KRT18P14-201ENST00000534205 1250 ntBASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 AC104564.3-201ENST00000582367 638 ntBASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 TERF1P2-201ENST00000583350 1212 ntBASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TBC1D28Q2M2D7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TBC1D28Q2M2D7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 MIR935-201ENST00000401179 91 ntBASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D28Q2M2D7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 AC034268.1-201ENST00000441047 882 ntBASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 KRT87P-202ENST00000534226 1464 ntBASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 AC003102.1-202ENST00000563394 1796 ntBASIC18.45■□□□□ 0.54
TBC1D28Q2M2D7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 AC026471.6-201ENST00000622954 1905 ntBASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D28Q2M2D7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 AC010542.4-201ENST00000563151 1910 ntBASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D28Q2M2D7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms