Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL20P78556 RPS2P35-201ENST00000443417 897 ntBASIC16.76■□□□□ 0.27
CCL20P78556 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCL20P78556 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.76■□□□□ 0.27
CCL20P78556 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL20P78556 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCL20P78556 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL20P78556 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL20P78556 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL20P78556 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL20P78556 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL20P78556 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.75■□□□□ 0.27
CCL20P78556 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL20P78556 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCL20P78556 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.75■□□□□ 0.27
CCL20P78556 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
CCL20P78556 AC104564.3-201ENST00000582367 638 ntBASIC16.75■□□□□ 0.27
CCL20P78556 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCL20P78556 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCL20P78556 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.75■□□□□ 0.27
CCL20P78556 C17orf82-201ENST00000623772 1530 ntBASIC16.75■□□□□ 0.27
CCL20P78556 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL20P78556 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCL20P78556 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.74■□□□□ 0.27
CCL20P78556 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.74■□□□□ 0.27
CCL20P78556 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CCL20P78556 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCL20P78556 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCL20P78556 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCL20P78556 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 AF131216.4-201ENST00000638924 1588 ntBASIC16.74■□□□□ 0.27
CCL20P78556 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.74■□□□□ 0.27
CCL20P78556 AC009086.3-201ENST00000623486 1008 ntBASIC16.74■□□□□ 0.27
CCL20P78556 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCL20P78556 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 FP325331.1-202ENST00000623531 1380 ntBASIC16.74■□□□□ 0.27
CCL20P78556 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCL20P78556 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCL20P78556 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CCL20P78556 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCL20P78556 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCL20P78556 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CCL20P78556 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCL20P78556 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL20P78556 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.73■□□□□ 0.27
CCL20P78556 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCL20P78556 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CCL20P78556 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
CCL20P78556 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.72■□□□□ 0.27
CCL20P78556 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL20P78556 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCL20P78556 AC004687.1-201ENST00000579003 1625 ntBASIC16.72■□□□□ 0.27
CCL20P78556 AC112907.3-201ENST00000577781 2400 ntBASIC16.72■□□□□ 0.27
CCL20P78556 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL20P78556 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL20P78556 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCL20P78556 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCL20P78556 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL20P78556 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL20P78556 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL20P78556 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms