Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNRPEP62304 AC110285.7-201ENST00000624417 1536 ntBASIC16.43■□□□□ 0.22
SNRPEP62304 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPEP62304 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.42■□□□□ 0.22
SNRPEP62304 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SNRPEP62304 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.42■□□□□ 0.22
SNRPEP62304 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SNRPEP62304 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPEP62304 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.42■□□□□ 0.22
SNRPEP62304 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SNRPEP62304 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SNRPEP62304 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SNRPEP62304 AL031258.1-201ENST00000623562 325 ntBASIC16.42■□□□□ 0.22
SNRPEP62304 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPEP62304 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPEP62304 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SNRPEP62304 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPEP62304 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPEP62304 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SNRPEP62304 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.42■□□□□ 0.22
SNRPEP62304 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.42■□□□□ 0.22
SNRPEP62304 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.42■□□□□ 0.22
SNRPEP62304 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPEP62304 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNRPEP62304 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SNRPEP62304 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNRPEP62304 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.41■□□□□ 0.22
SNRPEP62304 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SNRPEP62304 AP005212.1-201ENST00000581547 1997 ntBASIC16.41■□□□□ 0.22
SNRPEP62304 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRPEP62304 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.41■□□□□ 0.22
SNRPEP62304 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRPEP62304 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRPEP62304 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
SNRPEP62304 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRPEP62304 AC006077.2-201ENST00000623591 457 ntBASIC16.4■□□□□ 0.22
SNRPEP62304 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRPEP62304 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRPEP62304 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNRPEP62304 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRPEP62304 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
SNRPEP62304 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.39■□□□□ 0.22
SNRPEP62304 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRPEP62304 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SNRPEP62304 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SNRPEP62304 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRPEP62304 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SNRPEP62304 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRPEP62304 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRPEP62304 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SNRPEP62304 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SNRPEP62304 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRPEP62304 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SNRPEP62304 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC16.38■□□□□ 0.21
SNRPEP62304 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRPEP62304 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRPEP62304 AL032819.2-201ENST00000624543 2162 ntBASIC16.38■□□□□ 0.21
SNRPEP62304 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SNRPEP62304 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRPEP62304 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms